Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61948080 | chr13:46939164 | G/A | 4.73E-7 | 289 | 24.73 | 34.38 | 23.23 | KM Plot |
| KIRP | rs61948082 | chr13:46943254 | A/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948083 | chr13:46944110 | C/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948084 | chr13:46944381 | G/C | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948085 | chr13:46944598 | C/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948090 | chr13:46956362 | G/A | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948092 | chr13:46959568 | A/C | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948095 | chr13:46966179 | C/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948096 | chr13:46969316 | T/C | 6.35E-7 | 289 | 25.02 | 30.2 | 23.23 | KM Plot |
| KIRP | rs61948099 | chr13:46980896 | C/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948102 | chr13:46983589 | G/A | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948103 | chr13:46993748 | C/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948104 | chr13:46997261 | T/C | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948105 | chr13:46997533 | C/T | 4.91E-7 | 289 | 24.8 | 37.87 | 23.23 | KM Plot |
| KIRP | rs61948106 | chr13:46997909 | A/G | 1.81E-10 | 288 | 24.8 | 37.87 | 16.5 | KM Plot |